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JASPAR2018

Data package for JASPAR 2018


Bioconductor version: Release (3.18)

Data package for JASPAR 2018. To search this databases, please use the package TFBSTools (>= 1.15.6).

Author: Ge Tan <ge_tan at live.com>

Maintainer: Ge Tan <ge_tan at live.com>

Citation (from within R, enter citation("JASPAR2018")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("JASPAR2018")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, FunctionalAnnotation
Version 1.1.1
License GPL-2
Depends R (>= 3.4.0), methods
Imports
System Requirements
URL http://jaspar.genereg.net/
See More
Suggests TFBSTools(>= 1.15.6)
Linking To
Enhances
Depends On Me
Imports Me enrichTF, esATAC, primirTSS
Suggests Me MAGAR, pageRank, TFBSTools
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package JASPAR2018_1.1.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/JASPAR2018/
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