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BSgenome.Scerevisiae.UCSC.sacCer3

This is the released version of BSgenome.Scerevisiae.UCSC.sacCer3; for the devel version, see BSgenome.Scerevisiae.UCSC.sacCer3.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9

Saccharomyces cerevisiae (Yeast) full genome (UCSC version sacCer3)


Bioconductor version: Release (3.23)

Saccharomyces cerevisiae (Yeast) full genome as provided by UCSC (sacCer3, April 2011) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Scerevisiae.UCSC.sacCer3")):

The Bioconductor Dev Team. BSgenome.Scerevisiae.UCSC.sacCer3: Saccharomyces cerevisiae (Yeast) full genome (UCSC version sacCer3). doi:10.18129/B9.bioc.BSgenome.Scerevisiae.UCSC.sacCer3, R package version 1.4.0, https://bioconductor.org/packages/BSgenome.Scerevisiae.UCSC.sacCer3.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Scerevisiae.UCSC.sacCer3")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews AnnotationData, BSgenome, Genetics, Saccharomyces_cerevisiae
Version1.4.0
In Bioconductor sinceBioC 2.9 (R-2.14) (15 years)
License Artistic-2.0
Depends BSgenome (>= 1.33.5)
Imports BSgenome
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me generegulation
Imports Me
Suggests Me crispRdesignR, DNAshapeR, EpiTxDb, gmapR, HiContacts, Motif2Site, periodicDNA, tRNAscanImport, txcutr
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Scerevisiae.UCSC.sacCer3_1.4.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Scerevisiae.UCSC.sacCer3/
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