BSgenome.Rnorvegicus.UCSC.rn5
Full genome sequences for Rattus norvegicus (UCSC version rn5)
Bioconductor version: 3.23 · Package version: 1.4.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Full genome sequences for Rattus norvegicus (Rat) as provided by UCSC (rn5, Mar. 2012) and stored in Biostrings objects.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BSgenome.Rnorvegicus.UCSC.rn5")Details
| Maintainer | Bioconductor Package Maintainer <maintainer@bioconductor.org> |
| Author | The Bioconductor Dev Team |
| License | Artistic-2.0 |
| Source branch | RELEASE_3_23 |
| biocViews | AnnotationData, BSgenome, Genetics, Rattus_norvegicus |
| Package Short Url | https://bioconductor.org/packages/BSgenome.Rnorvegicus.UCSC.rn5/ |
Citation
From within R, enter citation("BSgenome.Rnorvegicus.UCSC.rn5"):
The Bioconductor Dev Team. BSgenome.Rnorvegicus.UCSC.rn5: Full genome sequences for Rattus norvegicus (UCSC version rn5). doi:10.18129/B9.bioc.BSgenome.Rnorvegicus.UCSC.rn5, R package version 1.4.0, https://bioconductor.org/packages/BSgenome.Rnorvegicus.UCSC.rn5.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | BSgenome.Rnorvegicus.UCSC.rn5_1.4.0.tar.gz |
Dependencies
Depends: BSgenome (>= 1.33.5)
Imports: BSgenome
Suggests: TxDb.Rnorvegicus.UCSC.rn5.refGene
Reverse dependencies
Depends On Me (1): BSgenome.Rnorvegicus.UCSC.rn5.masked
Imports Me (1): BSgenome.Rnorvegicus.UCSC.rn5.masked
Suggests Me (1): BSgenome