BSgenome.Hsapiens.UCSC.hg17

Full genome sequences for Homo sapiens (UCSC version hg17)

Bioconductor version: 3.23 · Package version: 1.3.1001

Other Bioconductor versions

devel is the development version; release is the current stable one.

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg17, May 2004) and stored in Biostrings objects.

DOI: 10.18129/B9.bioc.BSgenome.Hsapiens.UCSC.hg17

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Hsapiens.UCSC.hg17")

Details

Maintainer	Bioconductor Package Maintainer <maintainer@bioconductor.org>
Author	The Bioconductor Dev Team
License	Artistic-2.0
Status	Deprecated
Source branch	RELEASE_3_23
biocViews	AnnotationData, BSgenome, Genetics, Homo_sapiens
Package Short Url	https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg17/

Citation

From within R, enter citation("BSgenome.Hsapiens.UCSC.hg17"):

The Bioconductor Dev Team. BSgenome.Hsapiens.UCSC.hg17: Full genome sequences for Homo sapiens (UCSC version hg17). doi:10.18129/B9.bioc.BSgenome.Hsapiens.UCSC.hg17, R package version 1.3.1001, https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg17.

Generated from the package metadata; it may differ from the package's own citation.

Download

Follow the installation instructions to use this package in your R session.

Source package

BSgenome.Hsapiens.UCSC.hg17_1.3.1001.tar.gz

Dependencies

Depends: BSgenome (>= 1.33.5)

Imports: BSgenome

Suggests: GenomicFeatures

Reverse dependencies

Depends On Me (1): BSgenome.Hsapiens.UCSC.hg17.masked

Imports Me (1): BSgenome.Hsapiens.UCSC.hg17.masked