BSgenome.Drerio.UCSC.danRer5

Full genome sequences for Danio rerio (UCSC version danRer5)

Bioconductor version: 3.23 · Package version: 1.4.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer5, Jul. 2007) and stored in Biostrings objects.

DOI: 10.18129/B9.bioc.BSgenome.Drerio.UCSC.danRer5

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Drerio.UCSC.danRer5")

Details

Maintainer	Bioconductor Package Maintainer <maintainer@bioconductor.org>
Author	The Bioconductor Dev Team
License	Artistic-2.0
Source branch	RELEASE_3_23
biocViews	AnnotationData, BSgenome, Danio_rerio, Genetics
Package Short Url	https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer5/

Citation

From within R, enter citation("BSgenome.Drerio.UCSC.danRer5"):

The Bioconductor Dev Team. BSgenome.Drerio.UCSC.danRer5: Full genome sequences for Danio rerio (UCSC version danRer5). doi:10.18129/B9.bioc.BSgenome.Drerio.UCSC.danRer5, R package version 1.4.0, https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer5.

Generated from the package metadata; it may differ from the package's own citation.

Download

Follow the installation instructions to use this package in your R session.

Source package

BSgenome.Drerio.UCSC.danRer5_1.4.0.tar.gz

Dependencies

Depends: BSgenome (>= 1.33.5)

Imports: BSgenome

Suggests: GenomicFeatures

Reverse dependencies

Depends On Me (1): BSgenome.Drerio.UCSC.danRer5.masked

Imports Me (1): BSgenome.Drerio.UCSC.danRer5.masked