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BSgenome.Drerio.UCSC.danRer11

Full genome sequences for Danio rerio (UCSC version danRer11)

Bioconductor version: 3.23 · Package version: 1.4.2

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer11, May 2017) and stored in Biostrings objects.

DOI: 10.18129/B9.bioc.BSgenome.Drerio.UCSC.danRer11

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Drerio.UCSC.danRer11")

Details

MaintainerBioconductor Package Maintainer <maintainer@bioconductor.org>
AuthorThe Bioconductor Dev Team
LicenseArtistic-2.0
Source branchRELEASE_3_23
biocViewsAnnotationData, BSgenome, Danio_rerio, Genetics
Package Short Url https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer11/

Citation

From within R, enter citation("BSgenome.Drerio.UCSC.danRer11"):

The Bioconductor Dev Team. BSgenome.Drerio.UCSC.danRer11: Full genome sequences for Danio rerio (UCSC version danRer11). doi:10.18129/B9.bioc.BSgenome.Drerio.UCSC.danRer11, R package version 1.4.2, https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer11.

Generated from the package metadata; it may differ from the package's own citation.

Download

Follow the installation instructions to use this package in your R session.

Source packageBSgenome.Drerio.UCSC.danRer11_1.4.2.tar.gz
Dependencies

Depends: BSgenome (>= 1.55.1)

Imports: BSgenome

Suggests: GenomicFeatures