Bioconductor Developer Survey 2026 Now Open!

BSgenome.Alyrata.JGI.v1

Arabidopsis lyrata full genome (JGI version V1.0)

Bioconductor version: 3.23 · Package version: 1.0.1

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.

DOI: 10.18129/B9.bioc.BSgenome.Alyrata.JGI.v1

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Alyrata.JGI.v1")

Details

MaintainerJian-Feng Mao <jianfeng.mao@gmail.com>
AuthorJian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel
LicenseArtistic-2.0
Source branchRELEASE_3_23
biocViewsAlyrata, AnnotationData, Genetics
Package Short Url https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1/

Citation

From within R, enter citation("BSgenome.Alyrata.JGI.v1"):

Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel. BSgenome.Alyrata.JGI.v1: Arabidopsis lyrata full genome (JGI version V1.0). doi:10.18129/B9.bioc.BSgenome.Alyrata.JGI.v1, R package version 1.0.1, https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1.

Generated from the package metadata; it may differ from the package's own citation.

Download

Follow the installation instructions to use this package in your R session.

Source packageBSgenome.Alyrata.JGI.v1_1.0.1.tar.gz
Dependencies

Depends: BSgenome (>= 1.58.0)

Imports: BSgenome