sampleClassifier

Sample Classifier


Bioconductor version: Release (3.19)

The package is designed to classify microarray RNA-seq gene expression profiles.

Author: Khadija El Amrani [aut, cre]

Maintainer: Khadija El Amrani <a.khadija at gmx.de>

Citation (from within R, enter citation("sampleClassifier")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("sampleClassifier")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sampleClassifier")
sampleClassifier Vignette PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Classification, GeneExpression, ImmunoOncology, Microarray, RNASeq, Software
Version 1.28.0
In Bioconductor since BioC 3.5 (R-3.4) (7.5 years)
License Artistic-2.0
Depends R (>= 4.0), MGFM, MGFR, annotate
Imports e1071, ggplot2, stats, utils
System Requirements
URL
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Suggests sampleClassifierData, BiocStyle, hgu133a.db, hgu133plus2.db
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package sampleClassifier_1.28.0.tar.gz
Windows Binary (x86_64) sampleClassifier_1.28.0.zip (64-bit only)
macOS Binary (x86_64) sampleClassifier_1.28.0.tgz
macOS Binary (arm64) sampleClassifier_1.28.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/sampleClassifier
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/sampleClassifier
Bioc Package Browser https://code.bioconductor.org/browse/sampleClassifier/
Package Short Url https://bioconductor.org/packages/sampleClassifier/
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