rebook

This is the released version of rebook; for the devel version, see rebook.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12

Re-using Content in Bioconductor Books

Bioconductor version: Release (3.23)

Provides utilities to re-use content across chapters of a Bioconductor book. This is mostly based on functionality developed while writing the OSCA book, but generalized for potential use in other large books with heavy compute. Also contains some functions to assist book deployment.

Author: Aaron Lun [aut, cre, cph]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("rebook")):

Aaron Lun. rebook: Re-using Content in Bioconductor Books. doi:10.18129/B9.bioc.rebook, R package version 1.22.0, https://bioconductor.org/packages/rebook.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("rebook")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rebook")

Reusing book content	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Infrastructure, ReportWriting, Software
Version	1.22.0
In Bioconductor since	BioC 3.12 (R-4.0) (6 years)
License	GPL-3
Depends
Imports	utils, methods, knitr (>= 1.32), rmarkdown, CodeDepends, dir.expiry, filelock, BiocStyle
System Requirements
URL

Suggests	testthat, igraph, XML, BiocManager, RCurl, bookdown, rappdirs, yaml, BiocParallel, OSCA.intro, OSCA.workflows
Linking To
Enhances
Depends On Me	csawBook, OSCA, OSCA.advanced, OSCA.basic, OSCA.intro, OSCA.multisample, OSCA.workflows, SingleRBook
Imports Me
Suggests Me	OMA
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	rebook_1.22.0.tar.gz
Windows Binary (x86_64)	rebook_1.21.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	rebook_1.22.0.tgz
macOS Binary (sonoma-arm64)	rebook_1.22.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/rebook
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/rebook
Package Short Url	https://bioconductor.org/packages/rebook/
Package Downloads Report	Download Stats