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qpcrNorm

This is the released version of qpcrNorm; for the devel version, see qpcrNorm.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Data-driven normalization strategies for high-throughput qPCR data.


Bioconductor version: Release (3.23)

The package contains functions to perform normalization of high-throughput qPCR data. Basic functions for processing raw Ct data plus functions to generate diagnostic plots are also available.

Author: Jessica Mar

Maintainer: Jessica Mar <jess at jimmy.harvard.edu>

Citation (from within R, enter citation("qpcrNorm")):

Jessica Mar. qpcrNorm: Data-driven normalization strategies for high-throughput qPCR data. doi:10.18129/B9.bioc.qpcrNorm, R package version 1.70.0, https://bioconductor.org/packages/qpcrNorm.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("qpcrNorm")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("qpcrNorm")
qPCR Normalization Example PDF R Script
Reference ManualPDF

Details

biocViews GeneExpression, Preprocessing, Software
Version1.70.0
In Bioconductor sinceBioC 2.4 (R-2.9) (17.5 years)
License LGPL (>= 2)
Depends methods, Biobase, limma, affy
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package qpcrNorm_1.70.0.tar.gz
Windows Binary (x86_64) qpcrNorm_1.70.0.zip (64-bit only)
macOS Binary (big-sur-x86_64) qpcrNorm_1.70.0.tgz
macOS Binary (sonoma-arm64) qpcrNorm_1.70.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/qpcrNorm
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/qpcrNorm
Package Short Url https://bioconductor.org/packages/qpcrNorm/
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