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infinityFlow

Augmenting Massively Parallel Cytometry Experiments Using Multivariate Non-Linear Regressions

Bioconductor version: 3.23 · Package version: 1.22.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

Pipeline to analyze and merge data files produced by BioLegend's LEGENDScreen or BD Human Cell Surface Marker Screening Panel (BD Lyoplates).

DOI: 10.18129/B9.bioc.infinityFlow

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("infinityFlow")

Details

MaintainerEtienne Becht <etienne.becht@protonmail.com>
AuthorEtienne Becht [cre, aut]
LicenseGPL-3
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsCellBasedAssays, FlowCytometry, Proteomics, SingleCell, Software
Package Short Url https://bioconductor.org/packages/infinityFlow/

Citation

From within R, enter citation("infinityFlow"):

Etienne Becht. infinityFlow: Augmenting Massively Parallel Cytometry Experiments Using Multivariate Non-Linear Regressions. doi:10.18129/B9.bioc.infinityFlow, R package version 1.22.0, https://bioconductor.org/packages/infinityFlow.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageinfinityFlow_1.22.0.tar.gz
Windows binary (x86_64)infinityFlow_1.22.0.zip
macOS binary (arm64)infinityFlow_1.22.0.tgz
macOS binary (x86_64)infinityFlow_1.22.0.tgz
Dependencies

Depends: R (>= 4.0.0), flowCore

Imports: stats, grDevices, utils, graphics, pbapply, matlab, png, raster, grid, uwot, gtools, Biobase, generics, parallel, methods, xgboost (>= 3.0.0)

Suggests: knitr, rmarkdown, keras, tensorflow, glmnetUtils, e1071