To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("heatmaps")

In most cases, you don't need to download the package archive at all.

heatmaps

DOI: 10.18129/B9.bioc.heatmaps    

Flexible Heatmaps for Functional Genomics and Sequence Features

Bioconductor version: Release (3.5)

This package provides functions for plotting heatmaps of genome-wide data across genomic intervals, such as ChIP-seq signals at peaks or across promoters. Many functions are also provided for investigating sequence features.

Author: Malcolm Perry <mgperry32 at gmail.com>

Maintainer: Malcolm Perry <mgperry32 at gmail.com>

Citation (from within R, enter citation("heatmaps")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("heatmaps")

Documentation

HTML R Script Vignette Title
PDF   Reference Manual

Details

biocViews FunctionalGenomics, SequenceMatching, Software, Visualization
Version 1.0.0
In Bioconductor since BioC 3.5 (R-3.4) (< 6 months)
License Artistic-2.0
Depends R (>= 3.4)
Imports methods, grDevices, graphics, stats, Biostrings, GenomicRanges, IRanges, KernSmooth, plotrix, Matrix, EBImage, RColorBrewer, BiocGenerics, GenomeInfoDb
LinkingTo
Suggests BSgenome.Drerio.UCSC.danRer7, knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package heatmaps_1.0.0.tar.gz
Windows Binary heatmaps_1.0.0.zip
Mac OS X 10.11 (El Capitan) heatmaps_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/heatmaps
Package Short Url http://bioconductor.org/packages/heatmaps/
Package Downloads Report Download Stats

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