gypsum
Interface to the gypsum REST API
Bioconductor version: Release (3.19)
Client for the gypsum REST API (https://gypsum.artifactdb.com), a cloud-based file store in the ArtifactDB ecosystem. This package provides functions for uploads, downloads, and various adminstrative and management tasks. Check out the documentation at https://github.com/ArtifactDB/gypsum-worker for more details.
Author: Aaron Lun [aut, cre]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>
citation("gypsum")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("gypsum")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("gypsum")
Hitting the gypsum API | HTML | R Script |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | DataImport, Software |
Version | 1.0.1 |
In Bioconductor since | BioC 3.19 (R-4.4) (< 6 months) |
License | MIT + file LICENSE |
Depends | |
Imports | utils, tools, httr2, jsonlite, parallel, filelock |
System Requirements | |
URL | https://github.com/ArtifactDB/gypsum-R |
Bug Reports | https://github.com/ArtifactDB/gypsum-R/issues |
See More
Suggests | knitr, rmarkdown, testthat, BiocStyle, digest, jsonvalidate, DBI, RSQLite, S4Vectors, methods |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | celldex, scRNAseq |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | gypsum_1.0.1.tar.gz |
Windows Binary | gypsum_1.0.1.zip |
macOS Binary (x86_64) | gypsum_1.0.1.tgz |
macOS Binary (arm64) | gypsum_1.0.1.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/gypsum |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/gypsum |
Bioc Package Browser | https://code.bioconductor.org/browse/gypsum/ |
Package Short Url | https://bioconductor.org/packages/gypsum/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.19 | Source Archive |