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geneClassifiers

This is the released version of geneClassifiers; for the devel version, see geneClassifiers.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5

Application of gene classifiers


Bioconductor version: Release (3.23)

This packages aims for easy accessible application of classifiers which have been published in literature using an ExpressionSet as input.

Author: R Kuiper [cre, aut] ORCID iD ORCID: 0000-0002-3703-1762

Maintainer: R Kuiper <r.kuiper.emc at gmail.com>

Citation (from within R, enter citation("geneClassifiers")):

R Kuiper. geneClassifiers: Application of gene classifiers. doi:10.18129/B9.bioc.geneClassifiers, R package version 1.36.0, https://bioconductor.org/packages/geneClassifiers.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("geneClassifiers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneClassifiers")
geneClassifiers introduction PDF R Script
geneClassifiers and missing probesets PDF
Reference ManualPDF
NEWSText

Details

biocViews BiomedicalInformatics, Classification, GeneExpression, Microarray, Software, Survival
Version1.36.0
In Bioconductor sinceBioC 3.5 (R-3.4) (9.5 years)
License GPL-2
Depends R (>= 3.6.0)
Imports utils, methods, stats, Biobase, BiocGenerics
System Requirements
URLhttps://doi.org/doi:10.18129/B9.bioc.geneClassifiers
Bug Reportshttps://github.com/rkuiper/geneClassifiers/issues
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geneClassifiers_1.36.0.tar.gz
Windows Binary (x86_64) geneClassifiers_1.36.0.zip
macOS Binary (big-sur-x86_64) geneClassifiers_1.36.0.tgz
macOS Binary (sonoma-arm64) geneClassifiers_1.36.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/geneClassifiers
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/geneClassifiers
Package Short Url https://bioconductor.org/packages/geneClassifiers/
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