flowTrans

This is the released version of flowTrans; for the devel version, see flowTrans.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6

Parameter Optimization for Flow Cytometry Data Transformation

Bioconductor version: Release (3.23)

Profile maximum likelihood estimation of parameters for flow cytometry data transformations.

Author: Greg Finak <gfinak at fredhutch.org>, Juan Manuel-Perez <jperez at ircm.qc.ca>, Raphael Gottardo <rgottard at fredhutch.org>

Maintainer: Greg Finak <gfinak at fredhutch.org>

Citation (from within R, enter citation("flowTrans")):

Greg Finak, Juan Manuel-Perez, Raphael Gottardo. flowTrans: Parameter Optimization for Flow Cytometry Data Transformation. doi:10.18129/B9.bioc.flowTrans, R package version 1.64.0, https://bioconductor.org/packages/flowTrans.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowTrans")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowTrans")

flowTrans package	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	FlowCytometry, ImmunoOncology, Software
Version	1.64.0
In Bioconductor since	BioC 2.6 (R-2.11) (16.5 years)
License	Artistic-2.0
Depends	R (>= 2.11.0), flowCore, flowViz, flowClust
Imports	flowCore, methods, flowViz, stats, flowClust
System Requirements
URL

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Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowTrans_1.64.0.tar.gz
Windows Binary (x86_64)	flowTrans_1.64.0.zip
macOS Binary (big-sur-x86_64)	flowTrans_1.64.0.tgz
macOS Binary (sonoma-arm64)	flowTrans_1.64.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowTrans
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowTrans
Package Short Url	https://bioconductor.org/packages/flowTrans/
Package Downloads Report	Download Stats