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clusterStab

Compute cluster stability scores for microarray data

Bioconductor version: 3.23 · Package version: 1.84.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.

DOI: 10.18129/B9.bioc.clusterStab

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("clusterStab")

Details

MaintainerJames W. MacDonald <jmacdon@u.washington.edu>
AuthorJames W. MacDonald, Debashis Ghosh, Mark Smolkin
LicenseArtistic-2.0
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsClustering, Software
Package Short Url https://bioconductor.org/packages/clusterStab/

Citation

From within R, enter citation("clusterStab"):

James W. MacDonald, Debashis Ghosh, Mark Smolkin. clusterStab: Compute cluster stability scores for microarray data. doi:10.18129/B9.bioc.clusterStab, R package version 1.84.0, https://bioconductor.org/packages/clusterStab.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageclusterStab_1.84.0.tar.gz
Windows binary (x86_64)clusterStab_1.84.0.zip
macOS binary (arm64)clusterStab_1.84.0.tgz
macOS binary (x86_64)clusterStab_1.84.0.tgz
Dependencies

Depends: Biobase (>= 1.4.22), R (>= 1.9.0), methods

Suggests: fibroEset, genefilter