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chihaya

This is the released version of chihaya; for the devel version, see chihaya.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17

Save Delayed Operations to a HDF5 File


Bioconductor version: Release (3.23)

Saves the delayed operations of a DelayedArray to a HDF5 file. This enables efficient recovery of the DelayedArray's contents in other languages and analysis frameworks.

Author: Aaron Lun [cre, aut]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("chihaya")):

Aaron Lun. chihaya: Save Delayed Operations to a HDF5 File. doi:10.18129/B9.bioc.chihaya, R package version 1.12.0, https://bioconductor.org/packages/chihaya.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("chihaya")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chihaya")
User guide HTML R Script
Reference ManualPDF

Details

biocViews DataImport, DataRepresentation, Software
Version1.12.0
In Bioconductor sinceBioC 3.17 (R-4.3) (3.5 years)
License GPL-3
Depends DelayedArray
Imports methods, Matrix, rhdf5, Rcpp, HDF5Array
System RequirementsC++17, GNU make
URLhttps://github.com/ArtifactDB/chihaya-R
Bug Reportshttps://github.com/ArtifactDB/chihaya-R/issues
See More
Suggests BiocGenerics, S4Vectors, BiocSingular, ResidualMatrix, BiocStyle, testthat, rmarkdown, knitr
Linking To Rcpp, Rhdf5lib
Enhances
Depends On Me
Imports Me
Suggests Me alabaster.matrix
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package chihaya_1.12.0.tar.gz
Windows Binary (x86_64) chihaya_1.12.0.zip
macOS Binary (big-sur-x86_64) chihaya_1.12.0.tgz
macOS Binary (sonoma-arm64) chihaya_1.12.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/chihaya
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/chihaya
Package Short Url https://bioconductor.org/packages/chihaya/
Package Downloads ReportDownload Stats