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affyILM

This is the released version of affyILM; for the devel version, see affyILM.

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Linear Model of background subtraction and the Langmuir isotherm

DOI: 10.18129/B9.bioc.affyILM

Bioconductor version: Release (3.23)

affyILM is a preprocessing tool which estimates gene expression levels for Affymetrix Gene Chips. Input from physical chemistry is employed to first background subtract intensities before calculating concentrations on behalf of the Langmuir model.

Author: K. Myriam Kroll, Fabrice Berger, Gerard Barkema, Enrico Carlon

Maintainer: Myriam Kroll and Fabrice Berger <fabrice.berger at gmail.com>

Citation (from within R, enter citation("affyILM")):

K. Myriam Kroll, Fabrice Berger, Gerard Barkema, Enrico Carlon. affyILM: Linear Model of background subtraction and the Langmuir isotherm. doi:10.18129/B9.bioc.affyILM, R package version 1.64.0, https://bioconductor.org/packages/affyILM.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("affyILM")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("affyILM")

Details

Package Archives

Follow Installation instructions to use this package in your R session.