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RedeR

This is the released version of RedeR; for the devel version, see RedeR.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9

Interactive visualization and manipulation of nested networks

DOI: 10.18129/B9.bioc.RedeR

Bioconductor version: Release (3.23)

RedeR combines an R package with a stand-alone Java application for interactive visualization and manipulation of nested networks. Graph, node, and edge attributes can be configured using either graphical or command-line methods, following igraph syntax rules.

Author: Xin Wang [ctb], Florian Markowetz [ctb], Mauro Castro [aut, cre] ORCID: 0000-0003-4942-8131

Maintainer: Mauro Castro <mauro.a.castro at gmail.com>

Citation (from within R, enter citation("RedeR")):

Mauro Castro. RedeR: Interactive visualization and manipulation of nested networks. doi:10.18129/B9.bioc.RedeR, R package version 3.8.1, https://bioconductor.org/packages/RedeR.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RedeR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RedeR")

Details

Package Archives

Follow Installation instructions to use this package in your R session.