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Rcollectl

This is the released version of Rcollectl; for the devel version, see Rcollectl.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17

Help use collectl with R in Linux, to measure resource consumption in R processes


Bioconductor version: Release (3.23)

Provide functions to obtain instrumentation data on processes in a unix environment. Parse output of a collectl run. Vizualize aspects of system usage over time, with annotation.

Author: Vincent Carey [aut, cre] ORCID iD ORCID: 0000-0003-4046-0063 , Yubo Cheng [aut]

Maintainer: Vincent Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("Rcollectl")):

Vincent Carey, Yubo Cheng. Rcollectl: Help use collectl with R in Linux, to measure resource consumption in R processes. doi:10.18129/B9.bioc.Rcollectl, R package version 1.12.0, https://bioconductor.org/packages/Rcollectl.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rcollectl")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rcollectl")
Rcollectl HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews Infrastructure, Software
Version1.12.0
In Bioconductor sinceBioC 3.17 (R-4.3) (3.5 years)
License Artistic-2.0
Depends
Imports utils, ggplot2, lubridate, processx
System Requirementscollectl
URLhttps://github.com/vjcitn/Rcollectl
Bug Reportshttps://support.bioconductor.org/t/Rcollectl
See More
Suggests knitr, BiocStyle, knitcitations, sessioninfo, rmarkdown, testthat, covr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rcollectl_1.12.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/Rcollectl
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/Rcollectl
Package Short Url https://bioconductor.org/packages/Rcollectl/
Package Downloads ReportDownload Stats