Bioconductor Developer Survey 2026 Now Open!

REBET

This is the released version of REBET; for the devel version, see REBET.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8

The subREgion-based BurdEn Test (REBET)


Bioconductor version: Release (3.23)

There is an increasing focus to investigate the association between rare variants and diseases. The REBET package implements the subREgion-based BurdEn Test which is a powerful burden test that simultaneously identifies susceptibility loci and sub-regions.

Author: Bill Wheeler [cre], Bin Zhu [aut], Lisa Mirabello [ctb], Nilanjan Chatterjee [ctb]

Maintainer: Bill Wheeler <wheelerb at imsweb.com>

Citation (from within R, enter citation("REBET")):

Bin Zhu. REBET: The subREgion-based BurdEn Test (REBET). doi:10.18129/B9.bioc.REBET, R package version 1.30.0, https://bioconductor.org/packages/REBET.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("REBET")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("REBET")
REBET Vignette PDF R Script
Reference ManualPDF
NEWSText

Details

biocViews SNP, Software, VariantAnnotation
Version1.30.0
In Bioconductor sinceBioC 3.8 (R-3.5) (8 years)
License GPL-2
Depends ASSET
Imports stats, utils
System Requirements
URL
See More
Suggests RUnit, BiocGenerics
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package REBET_1.30.0.tar.gz
Windows Binary (x86_64) REBET_1.30.0.zip
macOS Binary (big-sur-x86_64) REBET_1.30.0.tgz
macOS Binary (sonoma-arm64) REBET_1.30.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/REBET
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/REBET
Package Short Url https://bioconductor.org/packages/REBET/
Package Downloads ReportDownload Stats