DOI: 10.18129/B9.bioc.RDRToolbox  

A package for nonlinear dimension reduction with Isomap and LLE.

Bioconductor version: Release (3.17)

A package for nonlinear dimension reduction using the Isomap and LLE algorithm. It also includes a routine for computing the Davis-Bouldin-Index for cluster validation, a plotting tool and a data generator for microarray gene expression data and for the Swiss Roll dataset.

Author: Christoph Bartenhagen

Maintainer: Christoph Bartenhagen <c.bartenhagen at uni-koeln.de>

Citation (from within R, enter citation("RDRToolbox")):


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PDF R Script A package for nonlinear dimension reduction with Isomap and LLE.
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biocViews Clustering, DimensionReduction, FeatureExtraction, Microarray, Software, Visualization
Version 1.50.0
In Bioconductor since BioC 2.7 (R-2.12) (13 years)
License GPL (>= 2)
Depends R (>= 2.9.0)
Imports graphics, grDevices, methods, stats, MASS, rgl
Suggests golubEsets
Depends On Me
Imports Me
Suggests Me loon
Links To Me
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Source Package RDRToolbox_1.50.0.tar.gz
Windows Binary RDRToolbox_1.50.0.zip
macOS Binary (x86_64) RDRToolbox_1.50.0.tgz
macOS Binary (arm64) RDRToolbox_1.50.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RDRToolbox
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RDRToolbox
Bioc Package Browser https://code.bioconductor.org/browse/RDRToolbox/
Package Short Url https://bioconductor.org/packages/RDRToolbox/
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