RDRToolbox
A package for nonlinear dimension reduction with Isomap and LLE.
Bioconductor version: 3.23 · Package version: 1.62.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
A package for nonlinear dimension reduction using the Isomap and LLE algorithm. It also includes a routine for computing the Davis-Bouldin-Index for cluster validation, a plotting tool and a data generator for microarray gene expression data and for the Swiss Roll dataset.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RDRToolbox")Details
| Maintainer | Christoph Bartenhagen <c.bartenhagen@uni-koeln.de> |
| Author | Christoph Bartenhagen |
| License | GPL (>= 2) |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Clustering, DimensionReduction, FeatureExtraction, Microarray, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/RDRToolbox/ |
Citation
From within R, enter citation("RDRToolbox"):
Christoph Bartenhagen. RDRToolbox: A package for nonlinear dimension reduction with Isomap and LLE. doi:10.18129/B9.bioc.RDRToolbox, R package version 1.62.0, https://bioconductor.org/packages/RDRToolbox.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | RDRToolbox_1.62.0.tar.gz |
| Windows binary (x86_64) | RDRToolbox_1.62.0.zip |
| macOS binary (arm64) | RDRToolbox_1.62.0.tgz |
| macOS binary (x86_64) | RDRToolbox_1.62.0.tgz |
Dependencies
Depends: R (>= 2.9.0)
Imports: graphics, grDevices, methods, stats, MASS, rgl
Suggests: golubEsets
Reverse dependencies
Suggests Me (1): loon