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PROPS

This is the released version of PROPS; for the devel version, see PROPS.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6

PRObabilistic Pathway Score (PROPS)

DOI: 10.18129/B9.bioc.PROPS

Bioconductor version: Release (3.23)

This package calculates probabilistic pathway scores using gene expression data. Gene expression values are aggregated into pathway-based scores using Bayesian network representations of biological pathways.

Author: Lichy Han

Maintainer: Lichy Han <lhan2 at stanford.edu>

Citation (from within R, enter citation("PROPS")):

Lichy Han. PROPS: PRObabilistic Pathway Score (PROPS). doi:10.18129/B9.bioc.PROPS, R package version 1.34.0, https://bioconductor.org/packages/PROPS.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PROPS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PROPS")

Details

Package Archives

Follow Installation instructions to use this package in your R session.