PROPER

PROspective Power Evaluation for RNAseq

Bioconductor version: 3.23 · Package version: 1.44.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

This package provide simulation based methods for evaluating the statistical power in differential expression analysis from RNA-seq data.

DOI: 10.18129/B9.bioc.PROPER

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PROPER")

Details

Maintainer	Hao Wu <hao.wu@emory.edu>
Author	Hao Wu
License	GPL
Source branch	RELEASE_3_23
Build report	Bioconductor build system, r-universe
biocViews	DifferentialExpression, ImmunoOncology, RNASeq, Sequencing, Software
Package Short Url	https://bioconductor.org/packages/PROPER/

Citation

From within R, enter citation("PROPER"):

Hao Wu. PROPER: PROspective Power Evaluation for RNAseq. doi:10.18129/B9.bioc.PROPER, R package version 1.44.0, https://bioconductor.org/packages/PROPER.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Power and Sample size analysis for gene expression from RNA-seq

Download

Follow the installation instructions to use this package in your R session.

Source package	PROPER_1.44.0.tar.gz
Windows binary (x86_64)	PROPER_1.44.0.zip
macOS binary (arm64)	PROPER_1.44.0.tgz
macOS binary (x86_64)	PROPER_1.44.0.tgz

Dependencies

Depends: R (>= 3.3)

Imports: edgeR

Suggests: BiocStyle, DESeq2, DSS, knitr

Reverse dependencies

Imports Me (1): cypress