OncoScore
A tool to identify potentially oncogenic genes
Bioconductor version: 3.23 · Package version: 1.40.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
OncoScore is a tool to measure the association of genes to cancer based on citation frequencies in biomedical literature. The score is evaluated from PubMed literature by dynamically updatable web queries.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("OncoScore")Details
| Maintainer | Luca De Sano <luca.desano@gmail.com> |
| Author | Luca De Sano [cre, aut] (ORCID: <https://orcid.org/0000-0002-9618-3774>), Carlo Gambacorti Passerini [ctb], Rocco Piazza [ctb], Daniele Ramazzotti [aut] (ORCID: <https://orcid.org/0000-0002-6087-2666>), Roberta Spinelli [ctb] |
| License | file LICENSE |
| URL | https://github.com/danro9685/OncoScore |
| Bug Reports | https://github.com/danro9685/OncoScore |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | BiomedicalInformatics, Software |
| Package Short Url | https://bioconductor.org/packages/OncoScore/ |
Citation
From within R, enter citation("OncoScore"):
Luca De Sano, Daniele Ramazzotti. OncoScore: A tool to identify potentially oncogenic genes. doi:10.18129/B9.bioc.OncoScore, R package version 1.40.0, https://bioconductor.org/packages/OncoScore.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | OncoScore_1.40.0.tar.gz |
| Windows binary (x86_64) | OncoScore_1.40.0.zip |
| macOS binary (arm64) | OncoScore_1.40.0.tgz |
| macOS binary (x86_64) | OncoScore_1.40.0.tgz |
Dependencies
Depends: R (>= 4.1.0)
Imports: biomaRt, grDevices, graphics, utils, methods
Suggests: BiocGenerics, BiocStyle, knitr, testthat