Omixer

DOI: 10.18129/B9.bioc.Omixer    

Randomize Samples for -omics Profiling

Bioconductor version: Release (3.12)

Omixer - an R package for multivariate and reproducible randomization with lab-friendly sample layouts. Omixer ensures optimal sample distribution across batches with well-documented methods, and can output intuitive sample sheets for the wet lab if needed.

Author: Lucy Sinke [cre, aut]

Maintainer: Lucy Sinke <l.j.sinke at lumc.nl>

Citation (from within R, enter citation("Omixer")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Omixer")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Omixer")

 

HTML R Script my-vignette
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews DataRepresentation, ExperimentalDesign, QualityControl, Software, Visualization
Version 1.0.0
In Bioconductor since BioC 3.12 (R-4.0) (< 6 months)
License MIT + file LICENSE
Depends R (>= 4.0.0)
Imports dplyr, ggplot2, forcats, tibble, gridExtra, magrittr, readr, tidyselect, grid, stats, stringr
LinkingTo
Suggests knitr, rmarkdown, BiocStyle, magick, testthat
SystemRequirements
Enhances
URL
BugReports https://github.com/molepi/Omixer/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Omixer_1.0.0.tar.gz
Windows Binary Omixer_1.0.0.zip
macOS 10.13 (High Sierra) Omixer_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Omixer
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Omixer
Package Short Url https://bioconductor.org/packages/Omixer/
Package Downloads Report Download Stats

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