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OLIN

This is the released version of OLIN; for the devel version, see OLIN.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Optimized local intensity-dependent normalisation of two-color microarrays


Bioconductor version: Release (3.23)

Functions for normalisation of two-color microarrays by optimised local regression and for detection of artefacts in microarray data

Author: Matthias Futschik <mfutschik at ualg.pt>

Maintainer: Matthias Futschik <mfutschik at ualg.pt>

Citation (from within R, enter citation("OLIN")):

Matthias Futschik. OLIN: Optimized local intensity-dependent normalisation of two-color microarrays. doi:10.18129/B9.bioc.OLIN, R package version 1.90.0, https://bioconductor.org/packages/OLIN.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("OLIN")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OLIN")
Introduction to OLIN PDF R Script
Reference ManualPDF

Details

biocViews Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version1.90.0
In Bioconductor sinceBioC 1.6 (R-2.1) or earlier (> 21.5 years)
License GPL-2
Depends R (>= 2.10), methods, locfit, marray
Imports graphics, grDevices, limma, marray, methods, stats
System Requirements
URLhttp://olin.sysbiolab.eu
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Suggests convert
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Depends On Me OLINgui
Imports Me OLINgui
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package OLIN_1.90.0.tar.gz
Windows Binary (x86_64) OLIN_1.90.0.zip
macOS Binary (big-sur-x86_64) OLIN_1.90.0.tgz
macOS Binary (sonoma-arm64) OLIN_1.90.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/OLIN
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/OLIN
Package Short Url https://bioconductor.org/packages/OLIN/
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