Bioconductor Developer Survey 2026 Now Open!

MeSHDbi

DBI to construct MeSH-related package from sqlite file

Bioconductor version: 3.23 · Package version: 1.48.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

The package is unified implementation of MeSH.db, MeSH.AOR.db, and MeSH.PCR.db and also is interface to construct Gene-MeSH package (MeSH.XXX.eg.db). loadMeSHDbiPkg import sqlite file and generate MeSH.XXX.eg.db.

DOI: 10.18129/B9.bioc.MeSHDbi

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MeSHDbi")

Details

MaintainerKoki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
AuthorKoki Tsuyuzaki
LicenseArtistic-2.0
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsAnnotation, AnnotationData, Infrastructure, Software
Package Short Url https://bioconductor.org/packages/MeSHDbi/

Citation

From within R, enter citation("MeSHDbi"):

Koki Tsuyuzaki. MeSHDbi: DBI to construct MeSH-related package from sqlite file. doi:10.18129/B9.bioc.MeSHDbi, R package version 1.48.0, https://bioconductor.org/packages/MeSHDbi.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageMeSHDbi_1.48.0.tar.gz
Windows binary (x86_64)MeSHDbi_1.48.0.zip
macOS binary (arm64)MeSHDbi_1.48.0.tgz
macOS binary (x86_64)MeSHDbi_1.48.0.tgz
Dependencies

Depends: R (>= 3.0.1)

Imports: methods, AnnotationDbi (>= 1.31.19), RSQLite, Biobase

Suggests: testthat

Reverse dependencies

Imports Me (3): meshes, meshr, scTensor