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MPFE

This is the released version of MPFE; for the devel version, see MPFE.

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3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0

Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data

DOI: 10.18129/B9.bioc.MPFE

Bioconductor version: Release (3.23)

Estimate distribution of methylation patterns from a table of counts from a bisulphite sequencing experiment given a non-conversion rate and read error rate.

Author: Peijie Lin, Sylvain Foret, Conrad Burden

Maintainer: Conrad Burden <conrad.burden at anu.edu.au>

Citation (from within R, enter citation("MPFE")):

Peijie Lin, Sylvain Foret, Conrad Burden. MPFE: Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data. doi:10.18129/B9.bioc.MPFE, R package version 1.48.0, https://bioconductor.org/packages/MPFE.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MPFE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MPFE")

Details

Package Archives

Follow Installation instructions to use this package in your R session.