IVAS
Identification of genetic Variants affecting Alternative Splicing
Bioconductor version: 3.23 · Package version: 2.32.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Identification of genetic variants affecting alternative splicing.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("IVAS")Details
| Maintainer | Seonggyun Han <hangost@ssu.ac.kr> |
| Author | Seonggyun Han, Sangsoo Kim |
| License | GPL-2 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | AlternativeSplicing, DifferentialExpression, DifferentialSplicing, GeneExpression, GeneRegulation, ImmunoOncology, RNASeq, Regression, SNP, Sequencing, Software, Transcription |
| Package Short Url | https://bioconductor.org/packages/IVAS/ |
Citation
From within R, enter citation("IVAS"):
Seonggyun Han, Sangsoo Kim. IVAS: Identification of genetic Variants affecting Alternative Splicing. doi:10.18129/B9.bioc.IVAS, R package version 2.32.0, https://bioconductor.org/packages/IVAS.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | IVAS_2.32.0.tar.gz |
| Windows binary (x86_64) | IVAS_2.32.0.zip |
| macOS binary (arm64) | IVAS_2.32.0.tgz |
| macOS binary (x86_64) | IVAS_2.32.0.tgz |
Dependencies
Depends: R (> 3.0.0), GenomicFeatures, ggplot2, Biobase
Imports: doParallel, lme4, BiocGenerics, GenomicRanges, IRanges, foreach, AnnotationDbi, S4Vectors, Seqinfo, ggfortify, grDevices, methods, Matrix, BiocParallel, utils, stats
Suggests: BiocStyle
Reverse dependencies
Depends On Me (1): IMAS