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GRmetrics

Calculate growth-rate inhibition (GR) metrics

Bioconductor version: 3.23 · Package version: 1.38.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

Functions for calculating and visualizing growth-rate inhibition (GR) metrics.

DOI: 10.18129/B9.bioc.GRmetrics

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GRmetrics")

Details

MaintainerNicholas Clark <nicholas.clark00@gmail.com>, Mario Medvedovic <medvedm@ucmail.uc.edu>
AuthorNicholas Clark
LicenseGPL-3
URLhttps://github.com/uc-bd2k/GRmetrics
Bug Reportshttps://github.com/uc-bd2k/GRmetrics/issues
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsCellBasedAssays, CellBiology, ImmunoOncology, Software, TimeCourse, Visualization
Package Short Url https://bioconductor.org/packages/GRmetrics/

Citation

From within R, enter citation("GRmetrics"):

Nicholas Clark. GRmetrics: Calculate growth-rate inhibition (GR) metrics. doi:10.18129/B9.bioc.GRmetrics, R package version 1.38.0, https://bioconductor.org/packages/GRmetrics.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageGRmetrics_1.38.0.tar.gz
Windows binary (x86_64)GRmetrics_1.38.0.zip
macOS binary (arm64)GRmetrics_1.38.0.tgz
macOS binary (x86_64)GRmetrics_1.38.0.tgz
Dependencies

Depends: R (>= 4.0), SummarizedExperiment

Imports: drc, plotly, ggplot2, S4Vectors, stats

Suggests: knitr, rmarkdown, BiocStyle, tinytex