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Cormotif

This is the released version of Cormotif; for the devel version, see Cormotif.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9

Correlation Motif Fit


Bioconductor version: Release (3.23)

It fits correlation motif model to multiple studies to detect study specific differential expression patterns.

Author: Hongkai Ji, Yingying Wei

Maintainer: Yingying Wei <ywei at jhsph.edu>

Citation (from within R, enter citation("Cormotif")):

Hongkai Ji, Yingying Wei. Cormotif: Correlation Motif Fit. doi:10.18129/B9.bioc.Cormotif, R package version 1.58.0, https://bioconductor.org/packages/Cormotif.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Cormotif")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Cormotif")
Cormotif Vignette PDF R Script
Reference ManualPDF

Details

biocViews DifferentialExpression, Microarray, Software
Version1.58.0
In Bioconductor sinceBioC 2.9 (R-2.14) (15 years)
License GPL-2
Depends R (>= 2.12.0), affy, limma
Imports affy, graphics, grDevices
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Cormotif_1.58.0.tar.gz
Windows Binary (x86_64) Cormotif_1.58.0.zip
macOS Binary (big-sur-x86_64) Cormotif_1.58.0.tgz
macOS Binary (sonoma-arm64) Cormotif_1.58.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/Cormotif
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/Cormotif
Package Short Url https://bioconductor.org/packages/Cormotif/
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