|
|
|
|
|
|
|
Bioconductor version: Release (3.18)
Fast and efficient reading and writing of mass spectrometry imaging data files. Supports imzML and Analyze 7.5 formats. Provides ontologies for mass spectrometry imaging.
Author: Kylie Ariel Bemis [aut, cre]
Maintainer: Kylie Ariel Bemis <k.bemis at northeastern.edu>
Citation (from within R,
enter citation("CardinalIO")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("CardinalIO")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CardinalIO")
HTML | R Script | Parsing and writing imzML files |
Reference Manual | ||
Text | NEWS |
biocViews | DataImport, ImagingMassSpectrometry, Infrastructure, MassSpectrometry, Software |
Version | 1.0.0 |
In Bioconductor since | BioC 3.18 (R-4.3) (< 6 months) |
License | Artistic-2.0 |
Depends | R (>= 4.3), matter, ontologyIndex |
Imports | methods, S4Vectors, stats, utils, tools |
LinkingTo | |
Suggests | BiocStyle, testthat, knitr, rmarkdown |
SystemRequirements | |
Enhances | |
URL | http://www.cardinalmsi.org |
BugReports | https://github.com/kuwisdelu/CardinalIO/issues |
Depends On Me | |
Imports Me | Cardinal |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | CardinalIO_1.0.0.tar.gz |
Windows Binary | CardinalIO_1.0.0.zip |
macOS Binary (x86_64) | CardinalIO_1.0.0.tgz |
macOS Binary (arm64) | CardinalIO_1.0.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/CardinalIO |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/CardinalIO |
Bioc Package Browser | https://code.bioconductor.org/browse/CardinalIO/ |
Package Short Url | https://bioconductor.org/packages/CardinalIO/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.18 | Source Archive |
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: