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CCAFE

This is the released version of CCAFE; for the devel version, see CCAFE.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21

Case Control Allele Frequency Estimation

DOI: 10.18129/B9.bioc.CCAFE

Bioconductor version: Release (3.23)

Functions to reconstruct case and control AFs from summary statistics. One function uses OR, NCase, NControl, and SE(log(OR)). The second function uses OR, NCase, NControl, and AF for the whole sample.

Author: Hayley Wolff [cre, aut]

Maintainer: Hayley Wolff <hayley.wolff at cuanschutz.edu>

Citation (from within R, enter citation("CCAFE")):

Hayley Wolff. CCAFE: Case Control Allele Frequency Estimation. doi:10.18129/B9.bioc.CCAFE, R package version 1.4.0, https://bioconductor.org/packages/CCAFE.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CCAFE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CCAFE")

Details

Package Archives

Follow Installation instructions to use this package in your R session.