AnVILPublish

DOI: 10.18129/B9.bioc.AnVILPublish    

Publish Packages and Other Resources to AnVIL Workspaces

Bioconductor version: Release (3.12)

Use this package to create or update AnVIL workspaces from resources such as R / Bioconductor packages. The metadata about the package (e.g., select information from the package DESCRIPTION file and from vignette YAML headings) are used to populate the 'DASHBOARD'. Vignettes are translated to python notebooks ready for evaluation in AnVIL.

Author: Martin Morgan [aut, cre]

Maintainer: Martin Morgan <mtmorgan.bioc at gmail.com>

Citation (from within R, enter citation("AnVILPublish")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AnVILPublish")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AnVILPublish")

 

HTML R Script Publishing R / Bioconductor packages to AnVIL Workspaces
PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Software
Version 1.0.0
In Bioconductor since BioC 3.12 (R-4.0) (< 6 months)
License Artistic-2.0
Depends
Imports AnVIL, httr, rmarkdown, whisker, tools, utils, stats
LinkingTo
Suggests knitr, BiocStyle, BiocManager
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AnVILPublish_1.0.0.tar.gz
Windows Binary AnVILPublish_1.0.0.zip
macOS 10.13 (High Sierra) AnVILPublish_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/AnVILPublish
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/AnVILPublish
Package Short Url https://bioconductor.org/packages/AnVILPublish/
Package Downloads Report Download Stats

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