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AGDEX

Agreement of Differential Expression Analysis


Bioconductor version: Release (3.18)

A tool to evaluate agreement of differential expression for cross-species genomics

Author: Stan Pounds <stanley.pounds at stjude.org>; Cuilan Lani Gao <cuilan.gao at stjude.org>

Maintainer: Cuilan lani Gao <cuilan.gao at stjude.org>

Citation (from within R, enter citation("AGDEX")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AGDEX")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AGDEX")
AGDEX.pdf PDF R Script
Reference Manual PDF

Details

biocViews GeneExpression, Genetics, Microarray, Software
Version 1.50.0
In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)
License GPL Version 2 or later
Depends R (>= 2.10), Biobase, GSEABase
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AGDEX_1.50.0.tar.gz
Windows Binary AGDEX_1.50.0.zip
macOS Binary (x86_64) AGDEX_1.50.0.tgz
macOS Binary (arm64) AGDEX_1.50.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/AGDEX
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/AGDEX
Bioc Package Browser https://code.bioconductor.org/browse/AGDEX/
Package Short Url https://bioconductor.org/packages/AGDEX/
Package Downloads Report Download Stats