plotGrouper
This is the released version of plotGrouper; for the devel version, see plotGrouper.
All Bioconductor versions of plotGrouper
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8
Shiny app GUI wrapper for ggplot with built-in statistical analysis
Bioconductor version: 3.23 · Package version: 1.30.0
A shiny app-based GUI wrapper for ggplot with built-in statistical analysis. Import data from file and use dropdown menus and checkboxes to specify the plotting variables, graph type, and look of your plots. Once created, plots can be saved independently or stored in a report that can be saved as a pdf. If new data are added to the file, the report can be refreshed to include new data. Statistical tests can be selected and added to the graphs. Analysis of flow cytometry data is especially integrated with plotGrouper. Count data can be transformed to return the absolute number of cells in a sample (this feature requires inclusion of the number of beads per sample and information about any dilution performed).
Author: John D. Gagnon [aut, cre]
Maintainer: John D. Gagnon <john.gagnon.42 at gmail.com>
Citation
From within R, enter citation("plotGrouper"):
John D. Gagnon. plotGrouper: Shiny app GUI wrapper for ggplot with built-in statistical analysis. doi:10.18129/B9.bioc.plotGrouper, R package version 1.30.0, https://bioconductor.org/packages/plotGrouper.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("plotGrouper")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.30.0 |
| License | GPL-3 |
| URL | https://jdgagnon.github.io/plotGrouper/ |
| Bug Reports | https://github.com/jdgagnon/plotGrouper/issues |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.8 (R-3.5) (7 years) |
| Downloads rank | 1834 of 2,418 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataImport, FlowCytometry, GUI, GraphAndNetwork, ImmunoOncology, MultipleComparison, Software, StatisticalMethod |
| Package Short Url | https://bioconductor.org/packages/plotGrouper/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("plotGrouper")| plotGrouper | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | plotGrouper_1.30.0.tar.gz |
| Windows binary (x86_64) | plotGrouper_1.30.0.zip |
| macOS binary (arm64) | plotGrouper_1.30.0.tgz |
| macOS binary (x86_64) | plotGrouper_1.30.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/plotGrouper |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/plotGrouper |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.5)
Imports: ggplot2 (>= 3.0.0), dplyr (>= 0.7.6), tidyr (>= 0.2.0), tibble (>= 1.4.2), stringr (>= 1.3.1), readr (>= 1.1.1), readxl (>= 1.1.0), scales (>= 1.0.0), stats, grid, gridExtra (>= 2.3), egg (>= 0.4.0), gtable (>= 0.2.0), ggpubr (>= 0.1.8), shiny (>= 1.1.0), shinythemes (>= 1.1.1), colourpicker (>= 1.0), magrittr (>= 1.5), Hmisc (>= 4.1.1), rlang (>= 0.2.2)