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mygene

This is the released version of mygene; for the devel version, see mygene.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0

Access MyGene.Info_ services


Bioconductor version: Release (3.23)

MyGene.Info_ provides simple-to-use REST web services to query/retrieve gene annotation data. It's designed with simplicity and performance emphasized. *mygene*, is an easy-to-use R wrapper to access MyGene.Info_ services.

Author: Adam Mark, Ryan Thompson, Cyrus Afrasiabi, Chunlei Wu

Maintainer: Adam Mark, Cyrus Afrasiabi, Chunlei Wu <cwu at scripps.edu>

Citation (from within R, enter citation("mygene")):

Adam Mark, Ryan Thompson, Cyrus Afrasiabi, Chunlei Wu. mygene: Access MyGene.Info_ services. doi:10.18129/B9.bioc.mygene, R package version 1.48.0, https://bioconductor.org/packages/mygene.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mygene")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mygene")
Using mygene.R PDF R Script
Reference ManualPDF

Details

biocViews Annotation, Software
Version1.48.0
In Bioconductor sinceBioC 3.0 (R-3.1) (12 years)
License Artistic-2.0
Depends R (>= 3.2.1), GenomicFeatures, txdbmaker
Imports methods, utils, stats, httr (>= 0.3), jsonlite (>= 0.9.7), Hmisc, sqldf, plyr, S4Vectors
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mygene_1.48.0.tar.gz
Windows Binary (x86_64) mygene_1.48.0.zip
macOS Binary (big-sur-x86_64) mygene_1.48.0.tgz
macOS Binary (sonoma-arm64) mygene_1.48.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/mygene
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/mygene
Package Short Url https://bioconductor.org/packages/mygene/
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