miRNAmeConverter

This is the released version of miRNAmeConverter; for the devel version, see miRNAmeConverter.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3

Convert miRNA Names to Different miRBase Versions

Bioconductor version: Release (3.23)

Translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

Author: Stefan Haunsberger [aut, cre]

Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>

Citation (from within R, enter citation("miRNAmeConverter")):

Stefan Haunsberger. miRNAmeConverter: Convert miRNA Names to Different miRBase Versions. doi:10.18129/B9.bioc.miRNAmeConverter, R package version 1.40.0, https://bioconductor.org/packages/miRNAmeConverter.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("miRNAmeConverter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Preprocessing, Software, miRNA
Version	1.40.0
In Bioconductor since	BioC 3.3 (R-3.3) (10.5 years)
License	Artistic-2.0
Depends	miRBaseVersions.db
Imports	DBI, AnnotationDbi, reshape2
System Requirements
URL

Suggests	methods, testthat, knitr, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	TCGAutils
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	miRNAmeConverter_1.40.0.tar.gz
Windows Binary (x86_64)	miRNAmeConverter_1.40.0.zip
macOS Binary (big-sur-x86_64)	miRNAmeConverter_1.40.0.tgz
macOS Binary (sonoma-arm64)	miRNAmeConverter_1.40.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/miRNAmeConverter
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/miRNAmeConverter
Package Short Url	https://bioconductor.org/packages/miRNAmeConverter/
Package Downloads Report	Download Stats