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marinerData

This is the released version of marinerData; for the devel version, see marinerData.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17

ExperimentHub data for the mariner package


Bioconductor version: Release (3.23)

Subsampled Hi-C in HEK cells expressing the NHA9 fusion with an F to S mutated IDR ("FS") or without any mutations to the IDR ("Wildtype" or "WT"). These files are used for testing mariner functions and some examples.

Author: Eric Davis [aut, cre] ORCID iD ORCID: 0000-0003-4051-3217

Maintainer: Eric Davis <ericscottdavis at outlook.com>

Citation (from within R, enter citation("marinerData")):

Eric Davis. marinerData: ExperimentHub data for the mariner package. doi:10.18129/B9.bioc.marinerData, R package version 1.12.0, https://bioconductor.org/packages/marinerData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("marinerData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("marinerData")
marinerData package HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews ExperimentData, ExperimentHub, SequencingData
Version1.12.0
In Bioconductor sinceBioC 3.17 (R-4.3) (3.5 years)
License GPL-3
Depends
Imports utils, ExperimentHub
System Requirements
URL
Bug Reportshttps://support.bioconductor.org/t/marinerData
See More
Suggests knitr, rmarkdown, ExperimentHubData, testthat (>= 3.0.0)
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me mariner
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package marinerData_1.12.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/marinerData
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/marinerData
Package Short Url https://bioconductor.org/packages/marinerData/
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