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maSigPro

This is the released version of maSigPro; for the devel version, see maSigPro.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Significant Gene Expression Profile Differences in Time Course Gene Expression Data


Bioconductor version: Release (3.23)

maSigPro is a regression based approach to find genes for which there are significant gene expression profile differences between experimental groups in time course microarray and RNA-Seq experiments.

Author: Ana Conesa and Maria Jose Nueda

Maintainer: Maria Jose Nueda <mj.nueda at ua.es>

Citation (from within R, enter citation("maSigPro")):

Ana Conesa and Maria Jose Nueda. maSigPro: Significant Gene Expression Profile Differences in Time Course Gene Expression Data. doi:10.18129/B9.bioc.maSigPro, R package version 1.84.0, https://bioconductor.org/packages/maSigPro.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("maSigPro")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maSigPro")
maSigPro Vignette PDF
maSigProUsersGuide.pdf PDF
Reference ManualPDF

Details

biocViews Differential Expression, Microarray, RNA-Seq, Software, TimeCourse
Version1.84.0
In Bioconductor sinceBioC 1.7 (R-2.2) (21 years)
License GPL (>= 2)
Depends R (>= 2.3.1)
Imports Biobase, graphics, grDevices, venn, mclust, stats, MASS
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package maSigPro_1.84.0.tar.gz
Windows Binary (x86_64) maSigPro_1.84.0.zip (64-bit only)
macOS Binary (big-sur-x86_64) maSigPro_1.84.0.tgz
macOS Binary (sonoma-arm64) maSigPro_1.84.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/maSigPro
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/maSigPro
Package Short Url https://bioconductor.org/packages/maSigPro/
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