m6Aboost
This is the released version of m6Aboost; for the devel version, see m6Aboost.
All Bioconductor versions of m6Aboost
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14
m6Aboost
Bioconductor version: 3.23 · Package version: 1.18.0
This package can help user to run the m6Aboost model on their own miCLIP2 data. The package includes functions to assign the read counts and get the features to run the m6Aboost model. The miCLIP2 data should be stored in a GRanges object. More details can be found in the vignette.
Author: You Zhou [aut, cre] 
, Kathi Zarnack [aut]
Maintainer: You Zhou <youzhoulearning at gmail.com>
Citation
From within R, enter citation("m6Aboost"):
You Zhou, Kathi Zarnack. m6Aboost: m6Aboost. doi:10.18129/B9.bioc.m6Aboost, R package version 1.18.0, https://bioconductor.org/packages/m6Aboost.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("m6Aboost")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.18.0 |
| License | Artistic-2.0 |
| URL | https://github.com/ZarnackGroup/m6Aboost |
| Bug Reports | https://github.com/ZarnackGroup/m6Aboost/issues |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.14 (R-4.1) (4 years) |
| Downloads rank | 1657 of 2,418 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Epigenetics, ExperimentHubSoftware, Genetics, Sequencing, Software |
| Package Short Url | https://bioconductor.org/packages/m6Aboost/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("m6Aboost")| Predicting m6A sites from miCLIP2 data with m6Aboost | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | m6Aboost_1.18.0.tar.gz |
| Windows binary (x86_64) | m6Aboost_1.18.0.zip |
| macOS binary (arm64) | m6Aboost_1.18.0.tgz |
| macOS binary (x86_64) | m6Aboost_1.18.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/m6Aboost |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/m6Aboost |
| Package Downloads Report | Download Stats |
Dependencies
Depends: S4Vectors, adabag, GenomicRanges, R (>= 4.1)
Imports: dplyr, rtracklayer, BSgenome, Biostrings, utils, methods, IRanges, ExperimentHub
Suggests: knitr, rmarkdown, bookdown, testthat, BiocStyle, BSgenome.Mmusculus.UCSC.mm10