ipdDb
This is the released version of ipdDb; for the devel version, see ipdDb.
All Bioconductor versions of ipdDb
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8
IPD IMGT/HLA and IPD KIR database for Homo sapiens
Bioconductor version: 3.23 · Package version: 1.30.0
All alleles from the IPD IMGT/HLA <https://www.ebi.ac.uk/ipd/imgt/hla/> and IPD KIR <https://www.ebi.ac.uk/ipd/kir/> database for Homo sapiens. Reference: Robinson J, Maccari G, Marsh SGE, Walter L, Blokhuis J, Bimber B, Parham P, De Groot NG, Bontrop RE, Guethlein LA, and Hammond JA KIR Nomenclature in non-human species Immunogenetics (2018), in preparation.
Author: Steffen Klasberg
Maintainer: Steffen Klasberg <klasberg at dkms-lab.de>
Citation
From within R, enter citation("ipdDb"):
Steffen Klasberg. ipdDb: IPD IMGT/HLA and IPD KIR database for Homo sapiens. doi:10.18129/B9.bioc.ipdDb, R package version 1.30.0, https://bioconductor.org/packages/ipdDb.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ipdDb")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.30.0 |
| License | Artistic-2.0 |
| URL | https://github.com/DKMS-LSL/ipdDb |
| Bug Reports | https://github.com/DKMS-LSL/ipdDb/issues/new |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.8 (R-3.5) (7 years) |
| Downloads rank | 1533 of 2,418 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | AnnotationHubSoftware, DataRepresentation, GenomicVariation, SequenceMatching, Software, VariantAnnotation |
| Package Short Url | https://bioconductor.org/packages/ipdDb/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ipdDb")| ipdDb | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | ipdDb_1.30.0.tar.gz |
| Windows binary (x86_64) | ipdDb_1.30.0.zip |
| macOS binary (arm64) | ipdDb_1.30.0.tgz |
| macOS binary (x86_64) | ipdDb_1.30.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/ipdDb |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ipdDb |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.5.0), methods, AnnotationDbi (>= 1.43.1), AnnotationHub
Imports: Biostrings, GenomicRanges, RSQLite, DBI, IRanges, stats, assertthat