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This is the development version of spatialDmelxsim; for the stable release version, see spatialDmelxsim.

Spatial allelic expression counts for fly cross embryo

Bioconductor version: Development (3.20)

Spatial allelic expression counts from Combs & Fraser (2018), compiled into a SummarizedExperiment object. This package contains data of allelic expression counts of spatial slices of a fly embryo, a Drosophila melanogaster x Drosophila simulans cross. See the CITATION file for the data source, and the associated script for how the object was constructed from publicly available data.

Author: Michael Love [aut, cre]

Maintainer: Michael Love <michaelisaiahlove at>

Citation (from within R, enter citation("spatialDmelxsim")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

spatialDmelxsim HTML R Script
Reference Manual PDF


biocViews Drosophila_melanogaster_Data, ExperimentData, ExperimentHub, ExpressionData, GEO, RNASeqData, SequencingData
Version 1.11.0
License GPL-3
Depends R (>= 4.1), ExperimentHub, SummarizedExperiment
Imports utils
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Source Package spatialDmelxsim_1.11.0.tar.gz
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