Registration Open for Bioc2024
Early registration discount pricing ends May 31!

geneLenDataBase

This is the development version of geneLenDataBase; for the stable release version, see geneLenDataBase.

Lengths of mRNA transcripts for a number of genomes


Bioconductor version: Development (3.20)

Length of mRNA transcripts for a number of genomes and gene ID formats, largely based on UCSC table browser. Data objects are provided as individual pieces of information to be retrieved and loaded. A variety of different gene identifiers and genomes is supported to ensure wide applicability.

Author: Matthew Young [aut], Nadia Davidson [aut], Federico Marini [ctb, cre]

Maintainer: Federico Marini <marinif at uni-mainz.de>

Citation (from within R, enter citation("geneLenDataBase")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("geneLenDataBase")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, Genome
Version 1.41.2
License LGPL (>= 2)
Depends R (>= 2.11.0)
Imports utils, rtracklayer, GenomicFeatures, txdbmaker
System Requirements
URL https://github.com/federicomarini/geneLenDataBase
Bug Reports https://github.com/federicomarini/geneLenDataBase/issues
See More
Suggests
Linking To
Enhances
Depends On Me goseq
Imports Me SMITE
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geneLenDataBase_1.41.2.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/geneLenDataBase
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geneLenDataBase
Package Short Url https://bioconductor.org/packages/geneLenDataBase/
Package Downloads Report Download Stats