breakpointRdata

This is the development version of breakpointRdata; for the stable release version, see breakpointRdata.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8

Strand-seq data for demonstration purposes

Bioconductor version: Development (3.24)

Strand-seq data to demonstrate functionalities of breakpointR package.

Author: David Porubsky, Aaron Taudt, Ashley Sanders

Maintainer: David Porubsky <david.porubsky at gmail.com>

Citation (from within R, enter citation("breakpointRdata")):

David Porubsky, Aaron Taudt, Ashley Sanders. breakpointRdata: Strand-seq data for demonstration purposes. doi:10.18129/B9.bioc.breakpointRdata, R package version 1.31.0, https://bioconductor.org/packages/breakpointRdata.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("breakpointRdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("breakpointRdata")

Example data for breakpointR	PDF	R Script
Reference Manual	PDF
NEWS	Text
LICENSE	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	DNASeqData, ExperimentData, Genome, Homo_sapiens_Data, SequencingData, SingleCellData
Version	1.31.0
In Bioconductor since	BioC 3.8 (R-3.5) (8 years)
License	file LICENSE
Depends	R (>= 3.5)
Imports
System Requirements
URL	https://github.com/daewoooo/breakpointRdata

Suggests	knitr, BiocStyle
Linking To
Enhances
Depends On Me	breakpointR
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	breakpointRdata_1.31.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/breakpointRdata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/breakpointRdata
Package Short Url	https://bioconductor.org/packages/breakpointRdata/
Package Downloads Report	Download Stats