TCGAWorkflowData
This is the development version of TCGAWorkflowData; for the stable release version, see TCGAWorkflowData.
Data for TCGA Workflow
Bioconductor version: Development (3.24)
This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".
Author: Tiago Chedraoui Silva <tiagochst at gmail.com>
Maintainer: Tiago Chedraoui Silva <tiagochst at gmail.com>
citation("TCGAWorkflowData")):Tiago Chedraoui Silva. TCGAWorkflowData: Data for TCGA Workflow. doi:10.18129/B9.bioc.TCGAWorkflowData, R package version 1.37.0, https://bioconductor.org/packages/TCGAWorkflowData.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("TCGAWorkflowData") For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TCGAWorkflowData") | 'Example data for TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages' | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CancerData, ExperimentData, Homo_sapiens_Data, MicroarrayData |
| Version | 1.37.0 |
| In Bioconductor since | BioC 3.5 (R-3.4) (9.5 years) |
| License | GPL-3 |
| Depends | R (>= 3.5.0) |
| Imports | SummarizedExperiment |
| System Requirements | |
| URL | https://f1000research.com/articles/5-1542/v2 |
| Bug Reports | https://github.com/BioinformaticsFMRP/TCGAWorkflow/issues |
See More
| Suggests | knitr, rmarkdown, pander, testthat, BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report, r-universe |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | TCGAWorkflowData_1.37.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/TCGAWorkflowData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TCGAWorkflowData |
| Package Short Url | https://bioconductor.org/packages/TCGAWorkflowData/ |
| Package Downloads Report | Download Stats |