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SimBenchData

SimBenchData: a collection of 35 single-cell RNA-seq data covering a wide range of data characteristics

Bioconductor version: 3.24 · Package version: 1.21.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

The SimBenchData package contains a total of 35 single-cell RNA-seq datasets covering a wide range of data characteristics, including major sequencing protocols, multiple tissue types, and both human and mouse sources.

DOI: 10.18129/B9.bioc.SimBenchData

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SimBenchData")

Details

MaintainerYue Cao <ycao6928@uni.sydney.edu.au>
AuthorYue Cao [aut, cre], Pengyi Yang [aut], Jean Yee Hwa Yang [aut]
LicenseGPL-3
Source branchdevel
Build report Bioconductor build system, r-universe
biocViewsExperimentData, ExperimentHub, RNASeqData, SequencingData, SingleCellData, Tissue
Package Short Url https://bioconductor.org/packages/SimBenchData/

Citation

From within R, enter citation("SimBenchData"):

Yue Cao, Pengyi Yang, Jean Yee Hwa Yang. SimBenchData: SimBenchData: a collection of 35 single-cell RNA-seq data covering a wide range of data characteristics. doi:10.18129/B9.bioc.SimBenchData, R package version 1.21.0, https://bioconductor.org/packages/SimBenchData.

Generated from the package metadata; it may differ from the package's own citation.

Download

Follow the installation instructions to use this package in your R session.

Source packageSimBenchData_1.21.0.tar.gz
Dependencies

Depends: ExperimentHub

Imports: S4Vectors, utils

Suggests: BiocStyle, knitr, rmarkdown, Seurat