PhyloProfileData
This is the development version of PhyloProfileData; for the stable release version, see PhyloProfileData.
Data package for phylogenetic profile analysis using PhyloProfile tool
Bioconductor version: Development (3.24)
Two experimental datasets to illustrate running and analysing phylogenetic profiles with PhyloProfile package.
Author: Vinh Tran [aut, cre]
, Ingo Ebersberger [aut], Hannah Mülbaier [ctb], Arpit Jain [ctb]
Maintainer: Vinh Tran <v.tran at ub.uni-frankfurt.de>
citation("PhyloProfileData")):Vinh Tran, Ingo Ebersberger. PhyloProfileData: Data package for phylogenetic profile analysis using PhyloProfile tool. doi:10.18129/B9.bioc.PhyloProfileData, R package version 1.27.1, https://bioconductor.org/packages/PhyloProfileData.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("PhyloProfileData") For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("PhyloProfileData") | PhyloProfileData | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | ExperimentData, ExperimentHub, ReproducibleResearch |
| Version | 1.27.1 |
| In Bioconductor since | BioC 3.10 (R-3.6) (7 years) |
| License | MIT + file LICENSE |
| Depends | R (>= 4.6.0) |
| Imports | ExperimentHub, Biostrings, BiocStyle |
| System Requirements | |
| URL | https://github.com/BIONF/PhyloProfileData |
| Bug Reports | https://github.com/trvinh/PhyloProfileData/issues |
See More
| Suggests | knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report, r-universe |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | PhyloProfileData_1.27.1.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/PhyloProfileData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/PhyloProfileData |
| Package Short Url | https://bioconductor.org/packages/PhyloProfileData/ |
| Package Downloads Report | Download Stats |