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MEDIPSData

This is the development version of MEDIPSData; for the stable release version, see MEDIPSData.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11

Example data for MEDIPS and QSEA packages


Bioconductor version: Development (3.24)

Example data for MEDIPS and QSEA packages, consisting of chromosome 22 MeDIP and control/Input sample data. Additionally, the package contains MeDIP seq data from 3 NSCLC samples and adjacent normal tissue (chr 20-22). All data has been aligned to human genome hg19.

Author: Lukas Chavez

Maintainer: Lukas Chavez <lchavez at liai.org>

Citation (from within R, enter citation("MEDIPSData")):

Lukas Chavez. MEDIPSData: Example data for MEDIPS and QSEA packages. doi:10.18129/B9.bioc.MEDIPSData, R package version 1.49.0, https://bioconductor.org/packages/MEDIPSData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("MEDIPSData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews ExperimentData, Genome, SequencingData
Version1.49.0
In Bioconductor sinceBioC 2.11 (R-2.15) (14 years)
License GPL (>= 2)
Depends R (>= 3.5)
Imports
System Requirements
URL
See More
Suggests MEDIPS, GenomicRanges, qsea
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me MEDIPS, qsea
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MEDIPSData_1.49.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/MEDIPSData
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/MEDIPSData
Package Short Url https://bioconductor.org/packages/MEDIPSData/
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